1. pairs.counter  (34,488 D1<-D2 pairs)
format: D1|D2|count
where the relationship between D1 and D2 is : D1<-D2, and count is the confidence score of the pair.

2. omim_risk.overlap
format: D1|D2|shared genes|count
disease-disease pairs (D1-D2) with shared genes (based on OMIM disease-gene associations). If the count >0, it means that D1-D2 pairs are D1<-D2 causal pairs. 


3. gwas_risk.overlap
format: D1|D2|shared genes|count
disease-disease pairs (D1-D2) with shared genes (based on GWAS catalog disease-gene associations ). If the count >0, it means that D1-D2 pairs are D1<-D2 causal pairs.


4.  clinicaltrials_risk.overlap
format: D1|D2|shared drugs|count
disease-disease pairs (D1-D2) with shared drugs (based on disease-drug pairs from clinicaltrials.gov ). If the count >0, it means that D1-D2 pairs are D1<-D2 causal pairs.


5. evalPatterns.curated

format: pattern|disease1|disease2|PMID_sentenceID|tagged sentence|year|class (0: incorrect; 0.5: partially correct; 1: correct)


6. final_patterns.txt

format: pattern|number of associated disease-disease risk pairs